Plant GARDEN How To ▶︎

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Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015937121.1_cds_XP_016482479.1_73705

CDS Infomation

[gene=LOC107803306] [db_xref=GeneID:107803306] [protein=squamous cell carcinoma antigen recognized by T-cells 3-like] [protein_id=XP_016482479.1] [location=complement(join(39044..39321,39982..40138,41418..41510,41611..41979,42447..42521,43248..43371,43487..43629,44681..44794,45524..45568,46320..46445,46542..46676,47143..47418,48013..48228,49225..49282,52543..52676,53357..53590))] [gbkey=CDS]

Sequence

ATGGCGGAAACCGTAACCCTAGATTCCTCTACCCATCCACCTCAACTTCCCGACGAAAAT
CCTACCGGAAACGATGACGAAGACATGCTCGACGCCCCGAAATCCACTAAAAGTTCCGAT
TCGGATTCCGACTCCGACTCCGACTCAGAGGATGACGCACAGCAGAATCTACAAATTCAA
GCTCTACAAACTGAGCTCTTAAATAACCCTTCCAATTACGATGCTCATGTTCAATACATA
AAAGCTTTAAGGAAGCAAGGGGATATAGAGAAGCTTAGACAAGCGAGGGAAGCCATGAAT
GCTATTTTTCCTTTGAGTTCTGAGATGTGGCAGGAGTGGACTAAAGATGAGACGTCTCTT
TCTTCGGGACCCGAGGCTCTCCCTGCAGTTGAGAAGCTATTTGAGCGTGGGGTGTCTGAC
TATCTTTCTGTTGCTTTGTGGTGTGACTACTTAAGTTTTGTTCAAGAGCATGACCAATCA
GTCCGTACCCGTTCCGTCAGTGGAATTTCAAAGGCAAGAAATCTCTTTGAACGTGCCATT
GTAGCTGCTGGTTTGCATGTTTCTGAAGGCAGCAGGATATGGGAATTATACAGGGAATTC
GAACAAGATATTTTCCTCACAATTGATGAAACTGATGCGGACTTGAGAGAGAAGCAGGTC
CAGCGTATTAGGAATTTATTCCATCGCCAGTTGTCTGTCCCTCTTGCTGATCTAAGTTCA
ACTCTTCACACATACAAGGCTTGGGAAGCAAAACAGGGAGCCGATCTTGATGTAGACTCC
AGTAACTTGGATGGGCTTTCGCCACATGTTGCCTCTTCATATCAGAAGGCCCTCGACATG
ATGAATGCCAGGACTCATCTTGAGAATCAAATATCTTGTAAAGTTGCACCTGAATCAGAA
AGACTTCAAAACTTTATGGCTTACTTAAAATTTGAGCAATCATTGGGGGATCCAGCAAGG
ATACAAATCTTATATGAGCGTGCCGTAACTGAATTTCCTATATCTAGTGAACTCTGGCTC
GATTATACTCACTACATGGATAAAACCTTGAAGACCTCCAGTCTTGTTCGGGACATTTAC
AAAAGGGCGACAAGGAACTGTCCCTGGGTTGGAGACCTGTGGGTGCGATACTTGCTGTCT
CTTGAACGCAGTCGTGCTTCTGAGGAAGAGCTATCTGCTGTTTTCGAGAAGGCCCTACAG
TGCACTTTCTCAAGCTTTGAAGAGTATCTTGATGTATTTCTCACAAGAGTTGATGGCTTA
AGGCGGAGGTTGTCTTCGTTGGAATCTGGGGCTGAAAGCAGCGACTTGGATTATATAATT
ATACGGGAAACTTTTCAGCGTGCATCAGATTATTTGTCTCCACATCTGAAGAATACAGAA
AGTTTATTGCGGATGTATAGATATTGGGCCCGCTTAGAATCAACTATGGGGAAAGATCTA
GCTGCAGCTCGTGGTGTCTGGGAGAGCCTGCTTAAAATCAGCGGATCTACGCTAGAGGCA
TGGCAAGGATACATAGCTATGGAAGTTGAGATGGGTAATATTAATGAAGCTCGATCCCAC
TTTAAGAAATGCTACAGCAAACGATTCCCTGGGACTGGCTCGGAGGACATATGCAATTCA
TGGATTCGCTTCGAGAGAGAGTATGGTGCACTTGAAGACTTTGACCTTGCAGTTAAAAAG
GTCACTCCTCGCCTTGAAGAACTGCAGTTATTCAAGTTACAAGAGGCTAAGAACATTGGT
GTGCCAGCAGATGATAGAGACAATTCCTCGAGGAAAAATGTGCGTGAAAAGAGGAAGCCA
GTATCAAATTTGATTGAAGAACAACCTCCTGCTAAACGTCACAAAGATAAAGCTAAGAAT
GTTAAGATCACTTCTGAAGATGGTAAAGGCCAAGTTAAAGACTCAGTCAAGGTAAATAAT
ACAAATCCAGATGTGGATGCCAGCAAACCAGCGAGTGGAAGCAAAAAAGAAAACAAAGAT
GTTTCTTCCGGAAAACCAAAGCAGTATAATGACCAGTGTACTGCATTTGTATCTAATCTT
AACCTCAAGGCAACGTATGACGACCTACGCAGATTCTTCAGTGATGTTGGAGGAGTGGTT
GCTATACGAATATTAAATGACAAGTTCACTGGAAAGTCGAGGGGATTGGCTTATGTGGAT
TTCTCGGATGACAAACACCTGGCTGCAGCCGTGGCAAAAAACAAGCAGACATTGCTTGGG
AAGAGATTGAGCATTGCTAAGTCAGATCCCAAAGGCAGAAAAAAAGGAAGCGATTCTCAC
GGTGTGTCTTCAAGACAAGGTGAAGGTGCTGAGCAAACTACTGAGAGTTCAAAACCAGGT
GCCAAGGATTCTGCTGAAGGTTCCAAGGAGGGCAAGGGGCATCAGGGGCAACCTTCTAGT
CATCAGTGGGCATCTAACATCCAGCTCAAAGGTAAGAATACGTTTGCGGTGCCCAGAACT
GTCAGGCCGCTTGGTTGGGTTGACAAAGATAAACCCAAATCCGAAGAAACTGATGCTACG
GAAGATGAAATTCCTAAATCCAATGATGAATTTCGGAAAATGTTCATCAAATCTTGA

Peptide Sequence

PEP ID

XP_016482479.1

PEP Infomation

PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3-like [Nicotiana tabacum]

Sequence

MAETVTLDSSTHPPQLPDENPTGNDDEDMLDAPKSTKSSDSDSDSDSDSEDDAQQNLQIQ
ALQTELLNNPSNYDAHVQYIKALRKQGDIEKLRQAREAMNAIFPLSSEMWQEWTKDETSL
SSGPEALPAVEKLFERGVSDYLSVALWCDYLSFVQEHDQSVRTRSVSGISKARNLFERAI
VAAGLHVSEGSRIWELYREFEQDIFLTIDETDADLREKQVQRIRNLFHRQLSVPLADLSS
TLHTYKAWEAKQGADLDVDSSNLDGLSPHVASSYQKALDMMNARTHLENQISCKVAPESE
RLQNFMAYLKFEQSLGDPARIQILYERAVTEFPISSELWLDYTHYMDKTLKTSSLVRDIY
KRATRNCPWVGDLWVRYLLSLERSRASEEELSAVFEKALQCTFSSFEEYLDVFLTRVDGL
RRRLSSLESGAESSDLDYIIIRETFQRASDYLSPHLKNTESLLRMYRYWARLESTMGKDL
AAARGVWESLLKISGSTLEAWQGYIAMEVEMGNINEARSHFKKCYSKRFPGTGSEDICNS
WIRFEREYGALEDFDLAVKKVTPRLEELQLFKLQEAKNIGVPADDRDNSSRKNVREKRKP
VSNLIEEQPPAKRHKDKAKNVKITSEDGKGQVKDSVKVNNTNPDVDASKPASGSKKENKD
VSSGKPKQYNDQCTAFVSNLNLKATYDDLRRFFSDVGGVVAIRILNDKFTGKSRGLAYVD
FSDDKHLAAAVAKNKQTLLGKRLSIAKSDPKGRKKGSDSHGVSSRQGEGAEQTTESSKPG
AKDSAEGSKEGKGHQGQPSSHQWASNIQLKGKNTFAVPRTVRPLGWVDKDKPKSEETDAT
EDEIPKSNDEFRKMFIKS

Transcript Sequence

Gene sequence data has not been registered.